Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs1857887 chr4:97279692 C/A 1.42E-5 283 26.37 26.2 18.9 KM Plot
KIRP rs186797104 chr11:47196047 C/T 4.98E-6 288 25.57 29.8 12.63 KM Plot
KIRP rs187404224 chr7:73003027 A/G 5.56E-6 285 26.4 18.9 11.2 KM Plot
KIRP rs187883871 chr7:20669408 G/A 8.35E-6 285 25.93 22.57 11.2 KM Plot
KIRP rs188465399 chr11:76293843 C/A 1.49E-6 285 25.7 27.98 16.38 KM Plot
KIRP rs188552254 chr19:19517169 A/G 4.9E-5 288 25.23 26.77 8.98 KM Plot
KIRP rs1886911 chr1:89510106 A/G 0.000153 281 19.27 32.65 26.57 KM Plot
KIRP rs1887734 chr14:70555591 C/G 2.56E-6 288 10.83 29.5 25.37 KM Plot
KIRP rs1893447 chr11:77973182 A/G 6.09E-5 285 26.28 21.97 19.27 KM Plot
KIRP rs1893595 chr21:44236632 A/C 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs1893596 chr21:44236697 A/G 0.000132 289 11.42 43.67 25.5 KM Plot
KIRP rs1893597 chr21:44236767 C/T 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs190312687 chr15:57596755 C/T 0 284 25.58 22.17 4.07 KM Plot
KIRP rs1910052 chr5:156429154 T/C 3.33E-6 289 12.1 25.18 26.28 KM Plot
KIRP rs1910053 chr5:156463063 G/A 8.88E-8 284 12.78 22.57 26.37 KM Plot